- paper.md: full paper (Tommi Niemi / Rotko Networks) - python/epimem.py: standalone Python reproduction - export_onnx.py: ONNX export from HuggingFace (generates model files) - results/memory_bank.json: example hidden-state vectors (896-dim) - schema/: FlatBuffer schemas for memory bank + organism - models/tokenizer/: Qwen 2.5 tokenizer files Run: pip install transformers torch && python python/epimem.py (Downloads Qwen 2.5 automatically from HuggingFace)
153 lines
5.3 KiB
Python
153 lines
5.3 KiB
Python
#!/usr/bin/env python3
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"""Export Qwen 2.5-0.5B as ONNX for the brain crate.
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Exports two models:
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1. backbone.onnx: token_ids → hidden_state at layer 23 (for key computation)
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2. lm_head.onnx: hidden_state → logits (for generation)
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Both together = full inference pipeline.
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Separately = teach only needs backbone, not lm_head.
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"""
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import torch
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import torch.nn as nn
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import os
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def export():
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from transformers import AutoModelForCausalLM, AutoTokenizer
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print("Loading Qwen 2.5-0.5B...")
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model = AutoModelForCausalLM.from_pretrained(
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'Qwen/Qwen2.5-0.5B', torch_dtype=torch.float32, trust_remote_code=True)
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tokenizer = AutoTokenizer.from_pretrained(
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'Qwen/Qwen2.5-0.5B', trust_remote_code=True)
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model.eval()
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D = model.config.hidden_size # 896
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n_layers = model.config.num_hidden_layers # 24
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V = model.config.vocab_size
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target_layer = n_layers - 1 # 23
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print(f" D={D}, layers={n_layers}, vocab={V}")
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os.makedirs("models", exist_ok=True)
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# ─── Export backbone: tokens → hidden at layer 23 ─────────
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class BackboneToLayer23(nn.Module):
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def __init__(self, model, target_layer):
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super().__init__()
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self.embed = model.model.embed_tokens
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self.layers = model.model.layers[:target_layer + 1]
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self.target_layer = target_layer
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self.rotary = model.model.rotary_emb
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self.post_attn_norm = model.model.layers[target_layer].post_attention_layernorm
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def forward(self, input_ids):
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x = self.embed(input_ids)
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B, T = input_ids.shape
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pos = torch.arange(T, device=input_ids.device).unsqueeze(0)
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pe = self.rotary(x, pos)
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for i, layer in enumerate(self.layers):
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if i == self.target_layer:
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residual = x
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x_normed = layer.input_layernorm(x)
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attn_out = layer.self_attn(
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x_normed, attention_mask=None,
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position_embeddings=pe)[0]
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x = residual + attn_out
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# Return pre-MLP hidden (what CTM/brain receives)
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hidden = self.post_attn_norm(x)
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# Also complete the layer for full hidden
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full = x + layer.mlp(hidden)
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return hidden, full
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else:
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x = layer(x, position_embeddings=pe)
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return x, x
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# ─── Export lm_head: full_hidden → logits ─────────────────
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class LMHead(nn.Module):
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def __init__(self, model):
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super().__init__()
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# Remaining layers after target + final norm + lm_head
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self.final_norm = model.model.norm
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self.lm_head = model.lm_head
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def forward(self, full_hidden):
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x = self.final_norm(full_hidden)
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return self.lm_head(x)
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# Export backbone
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print("Exporting backbone (tokens → hidden)...")
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backbone = BackboneToLayer23(model, target_layer)
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dummy_ids = torch.randint(0, V, (1, 32))
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with torch.no_grad():
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hidden, full = backbone(dummy_ids)
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print(f" hidden: {hidden.shape}, full: {full.shape}")
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torch.onnx.export(
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backbone, dummy_ids,
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"models/backbone.onnx",
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input_names=["input_ids"],
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output_names=["hidden", "full_hidden"],
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dynamic_axes={
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"input_ids": {0: "batch", 1: "seq_len"},
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"hidden": {0: "batch", 1: "seq_len"},
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"full_hidden": {0: "batch", 1: "seq_len"},
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},
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opset_version=17,
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)
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backbone_size = os.path.getsize("models/backbone.onnx")
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print(f" Saved models/backbone.onnx ({backbone_size / 1e6:.1f} MB)")
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# Export lm_head
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print("Exporting lm_head (hidden → logits)...")
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head = LMHead(model)
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dummy_hidden = torch.randn(1, 32, D)
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torch.onnx.export(
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head, dummy_hidden,
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"models/lm_head.onnx",
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input_names=["full_hidden"],
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output_names=["logits"],
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dynamic_axes={
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"full_hidden": {0: "batch", 1: "seq_len"},
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"logits": {0: "batch", 1: "seq_len"},
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},
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opset_version=17,
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)
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head_size = os.path.getsize("models/lm_head.onnx")
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print(f" Saved models/lm_head.onnx ({head_size / 1e6:.1f} MB)")
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# Save tokenizer
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tokenizer.save_pretrained("models/tokenizer")
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print(f" Saved models/tokenizer/")
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# Verify
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print("\nVerifying ONNX export...")
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import onnxruntime as ort
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sess_backbone = ort.InferenceSession("models/backbone.onnx")
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sess_head = ort.InferenceSession("models/lm_head.onnx")
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test_text = "The capital of France is"
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ids = tokenizer.encode(test_text, add_special_tokens=False)
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input_ids = torch.tensor([ids]).numpy()
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hidden_out, full_out = sess_backbone.run(None, {"input_ids": input_ids})
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logits_out = sess_head.run(None, {"full_hidden": full_out})
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next_token = logits_out[0][0, -1].argmax()
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predicted = tokenizer.decode([next_token])
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print(f" '{test_text}' → '{predicted}'")
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print(f" Hidden shape: {hidden_out.shape}")
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print(f" Logits shape: {logits_out[0].shape}")
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print("\nDone. Total model size:",
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f"{(backbone_size + head_size) / 1e6:.1f} MB")
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if __name__ == "__main__":
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export()
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